Publications 2003



Department of Biogeochemistry


Direktor: Prof. Dr. Bo Barker Jørgensen



Department of Biogeochemistry: Biogeochemistry group



Arnosti, C. and B. B. Jørgensen. 2003. High activity and low temperature optima of extracellular enzymes in Arctic sediments: implications for carbon cycling by heterotrophic microbial communities. Marine Ecology Progress Series 249: 15-24.


Boetius, A., B. B. Jørgensen, R. Amann, J. P. Henriet, K. U. Hinrichs, K. Lochte, B. J. MacGregor and G. Voordouw. 2003. Microbial systems in sedimentary environments of continental margins, p. 479-495. In G. Wefer, D. Billet, D. Hebbeln, B. B. Jørgensen, M. Schlüter and T. v. Weering (ed.), Ocean Margin Systems. Springer Verlag, Berlin.


Brüchert, V. and C. Arnosti. 2003. Anaerobic Carbon Transformation:Experimental Studies With Flow-Through Cells. Marine Chemisty 80: 171-183.


Brüchert, V., B. B. Jørgensen, K. Neumann, D. Riechmann, M. Schlösser and H. Schulz. 2003. Regulation of bacterial sulfate reduction and hydrogen sulfide fluxes in the central Namibian coastal upwelling zone. Geochimica et Cosmochimica Acta 67: 4505-4518.


D´Hondt, S., B. B. Jørgensen, J. Miller and the Leg 201 Scientific party. 2003. Controls on Microbial Communities in Deeply Buried Sediments, Eastern Equatorial Pacific and Peru Margin Sites 1225-1231, 27 January – 29 March 2002. Proceedings of the Ocean Drilling Program, Initial Reports Vol. 201, National Science Foundation and Joint Oceanographic Instituteions, Inc. (eds.).


D´Hondt, S., B. B. Jørgensen, J. Miller and the Leg 201 Scientific party. 2003. ODP Leg 201 explores microbial life in deeply buried marine sediments of Peru, JOIDES Journal, Vol. 29, No. 1, 11-15.


Elvert, M., A. Boetius, K. Knittel and B. B. Jørgensen. 2003. Characterization of specific membrane fatty acids as chemotaxonomic markers for sulfate-reducing bacteria involved in anaerobic oxidation of methane. Geomicrobiology Journal, 20: 403-419.


Jetten, M. S. M., O. Sliekers, M. M. M. Kuypers, T. Dalsgaard, L. van Niftrik, I. Cirpus, K. van de Pas-Schoonen, G. Lavik, B. Thamdrup, D. Les Paslier, H. Op den Camp, S. Hulth, L. P. Nielsen, W. Abma, K. Third, P. Engström, J. G. Kuenen, B. Barker Jørgensen, D. Canfield, J. S. Sinninghe Damsté, N. P. Revsbech, J. Fuerst, J. Weissenbach, M. Wagner, I. Schmidt, M. Schmid and M. Strous. 2003. Anaerobic ammonium oxidation by marine and freshwater planctomycete-like bacteria. Applied Microbiology Biotechnology 63: 107-114.


Jørgensen, B. B. 2003. Life in the deep sub-seafloor biosphere. Energy, Exploration & Exploitation 21: 319-322.


Kallmeyer, J., T. G. Ferdelman, K.-H. Jansen and B. B. Jørgensen. 2003. A high-pressure thermal gradient block for investigating microbial activity in multiple deep-sea samples. Journal of Microbiological Methods 55: 165-172.


Klages, M., A. Boetius, J. P. Christensen, H. Deubel, D. Piepenburg, I. Schewe and T. Soltwedel. 2003. The benthos of Arctic Seas and its role for the carbon cycle at the seafloor, p. 139-167 In R. Stein, R. W. Macdonald (eds.) The Arctic Organic Carbon Cycle, Springer Verlag, Heidelberg.


Kuypers, M. M. M., A. O. Sliekers, G. Lavik, M. Schmid, B. B. Jørgensen, J. G. Kuenen, J. S. Sinninghe Damsté, M. Strous and M. S. M. Jetten. 2003. Anaerobic ammonium oxidation by anammox bacteria in the Black Sea. Nature 422: 608-611.


Neretin, L. N., M. E. Böttcher and V. A. Grinenko. 2003. Sulfur isotope geochemistry of the Black Sea water column. Chemical Geology 200: 59-69.


Neretin, L. N., C. Pohl, G. Jost, T. Leipe and F. Pollehne. 2003. Manganese cycling in the Gotland Deep, Baltic Sea. Marine Chemistry 82: 125-143.


Neretin, L., A. Schippers, A. Pernthaler, K. Hamann, R. Amann and B. B. Jørgensen. 2003. Quanitification of dissimilatory (bi)sulphite reductase gene expression in Desulfobacterium autotrophicum using real-time RT-PCR. Environmental Microbiology 5: 660-671.


Revsbech, N. P. and B. B. Jørgensen. 2003. The role of microorganisms in aquatic environments (in Danish), p. 365-387. In A. W. Hansen et. al. (eds.), Top research at the University of Aarhus. Acta Jutlandica 78, Aarhus Universitetsforlag.


Sinninghe Damsté, J. S., M. M. M. Kuypers, S. Schouten, S. Schulte and J. Rullkötter. 2003. The lycopane/C31 n-alkane ratio as a proxy to assess palaeoxicity during sediment deposition. Earth and Planetary Science Letters 209: 215-226.


Treude, T., A. Boetius, K. Knittel, K. Wallmann and B. B. Joergensen. 2003. Anaerobic oxidation of methane above gas hydrates at Hydrate Ridge, NE Pacific. Marine Ecology Progress Series 264: 1-14.


Wefer, G., D. Billet, D. Hebbeln, B. B. Jørgensen, M. Schlüter, T. van Weering (eds.). 2003. Ocean Margin Systems, 495 pp. Springer Verlag, Berlin.



Theses

Diploma theses

Stephanie Batel. 2003. Biogeochemische Umsatzprozesse in einem tidalen Oberflächensediment der südlichen Nordsee. Universität Oldenburg.

(Supervisor: Michael E. Böttcher)


Heiko Löbner. 2003. Der regulatorische Einfluß der Sulfat-und Methankonzentration auf die anaerobe Methanoxidation in marinen Sedimenten. (Supervisor: Antje Boetius)



Kyriakos Vamvakoupolos. 2003. Entwicklung einer Einbettungsmethode für die Untersuchung intakter Sedimentstrukturen mit Fokus auf die dort lebenden Mikroorganismen (Supervisor: Ole Larsen)

Ph. D. theses

Niko Finke. 2003. The role of volatile fatty acids and hydrogen in the degradation of organic matter in marine sediments. (Supervisor: Bo Barker Jørgensen)


Jens Kallmeyer. 2003. Sulfate reduction in the deep biosphere. (Supervisor: Tim Ferdelman)

Habilitation theses

Michael Böttcher. 2003. Contributions to the biogeochemistry of early diagenetic processes in continental margin sediments with special regard to manganese and stable isotopes (S, O).




Department of Biogeochemistry: Microsensor Group



Altmann, D., P. Stief, R. Amann, D. de Beer and A. Schramm. 2003. In situ distribution and activity of nitrifying bacteria in freshwater sediment. Environmental Microbiology 5: 798-803.


Gieseke, A., L. Bjerrum, M. Wagner and R. Amann. 2003. Structure and activity of multiple nitrifying bacterial populations co-existing in a biofilm. Environmental Microbiology 5: 355-369.


Grossart, H.-P., T. Kiørboe, K. Tang and H. Ploug. 2003. Bacterial Colonization of Marine Snow Particles: Growth and Inter-Specific Interactions. Applied and Environmental Microbiology 69: 3500-3509.


Jonkers, H. M. and R. M. M. Abed. 2003. Identification of aerobic heterotrophic bacteria from the photic zone of a hypersaline microbial mat. Aquatic Microbial Ecoloby 30: 127-133.


Jonkers, H. M., R. Ludwig, R. de Wit, O. Pringault, G. Muyzer, H. Niemann, N. Finke and D. de Beer. 2003. Structural and functional analysis of a microbial mat ecosystem from a unique permanent hypersaline inland lake: 'La Salada de Chiprana' (NE Spain). FEMS Microbiology Ecology 44: 175-189.


Passow, U., A. Engel and H. Ploug. 2003. The role of aggregation for the dissolution of diatom frustules. FEMS Microbiology Ecology 46: 247-255.


Stief, P., A. Schramm, D. Altmann and D. de Beer. 2003. Temporal variation of nitrification rates in experimental freshwater sediments enriched with ammonia or nitrite. FEMS Microbiology Ecology 46: 63-71.



van Keulen, G., H. M. Jonkers, D. Claessen, L. Dijkhuizen and H. A. B. Wösten. 2003. Differentiation and Anaerobiosis in Standing Liquid Cultures of Streptomyces coelicolor. Journal of Bacteriology 185: 1455-1458.

Theses

Ph. D. theses

Dörte Altmann. 2003. Nitrification in freshwater sediments as studied with microsensors and fluorescence in situ hybridization. (Supervisor: Peter Stief)



Björn Grunwald. 2003. Optoelektronische Meßsysteme hoher örtlicher Auflösung für phototrophe Organismen. (Supervisor: Gerhard Holst)



Department of Biogeochemistry: Flux Group


Aberle, N. and U. Witte. 2003. Deep-sea macrofauna exposed to a simulated sedimentation event in the abyssal NE Atlantic: in situ pulse chase experiments using 13C labeled phytodetritus. Marine Ecology Progress Series 251: 37-47.


Aspetsberger, F., F. Huber, S. Kargl, B. Scharinger, P. Peduzzi and T. Hein. 2003. Particulate organic matter dynamics in a river floodplain system: impact of hydrological connectivity. Archives of Hydrobiology 156: 23-42.


Berg, P., H. Røy, F. Janssen, V. Meyer, B. B. Jørgensen, M. Huettel and D. de Beer. 2003. Oxygen uptake by aquatic sediments measured with a novel non-invasive eddy-correlation technique. Marine Ecology Progress Series 261: 75-83.


Burnett, W., H. Bokuniewicz, M. Huettel, W. S. Moore and M. Taniguchi. 2003. Groundwater and pore water inputs to the coastal zone. Biogeochemistry 66: 3-33.


Fabricius, K., C. Wild, E. Wolanski and D. Abele. 2003. Effect of transparent exopolymer particles and muddy terrigenous sediments on the survival of hard coral recruits. Estuarine Coastal Shelf Science 57: 613-621.


Forster, S., A. Khalili and J. Kitlara. 2003. Variation of non-local irrigation in a subtidal benthic community. Journal of Marine Research 61: 335-357.


Glud, R. N., J. K. Gundersen, H. Røy and B. B. Jørgensen. 2003. Seasonal dynamics of benthic O2 uptake in a semi enclosed bay: Importance of diffusion and fauna activity. Limnology and Oceanography 48: 1265-1276.


Huettel, M., H. Røy, E. Precht and S. Ehrenhauss. 2003. Hydrodynamical impact on biogeochemical processes in aquatic sediments. Hydrobiologia 494: 231-236.


Khalili, A. and I. S. Shivakumara. 2003. Non-Darcian effects on the onset of convection in a porous layer with throughflow. Transport in Porous Media 53: 245-263.


Precht, E. and M. Huettel. 2003. Advective pore water exchange driven by surface gravity waves and its ecological implications. Limnology and Oceanography 48: 1674-1684.


Rasheed, M., M. Badran and M. Huettel. 2003. Influence of sediment permeability and mineral composition on organic matter decomposition in three sediments from the Gulf of Aqaba, Red Sea. Estuarine Coastal Shelf Science 57: 369-384.


Rasheed, M., M. Badran and M. Huettel. 2003. Particulate matter filtration and seasonal nutrient dynamics in permeable carbonate and silicate sands of the Gulf of Aqaba, Red Sea. Coral Reefs 22: 167-177.


Reimers, C. E., H. A. Stecher, G. L. Taghon, C. M. Fuller, M. Huettel, A. Rusch, N. Ryckelynck and C. Wild. 2003. In-situ measurements of advective solute transport in permeable shelf sands. Continental Shelf Research, in press.


Rusch, A., M. Huettel, C. E. Reimers, G. L. Taghon and C. M. Fuller. 2003. Activity and distribution of bacterial populations in Middle Atlantic Bight shelf sands. FEMS Microbiology Ecology 44: 89-100.


Viollier, E., C. Rabouille, S. E. Apitz, E. Breuer, G. Chaillou, K. Dedieu, Y. Furakawa, C. Grenz, P. Hall, F. Janssen, J. L. Morford, J.-C. Poggiale, S. Roberts, T. Shimmield, M. Taillefert, A. Tengberg, F. Wenzhöfer and U. Witte. 2003. Benthic biogeochemistry: state of the art technologies and guidelines for the future of in situ survey. Journal of Experimental Marine Biology and Ecology 285-286: 5-31.


Witte, U., N. Aberle, M. Sand and F. Wenzhöfer. 2003. Rapid response of a deep-sea benthic community to POM enrichment: an in situ experimental study. Marine Ecology Progress Series 251: 27-36.



Witte, U., F. Wenzhöfer, S. Sommer, A. Boetius, P. Heinz, N. Aberle, M. Sand, A. Cremer, W.-R. Abraham, B. B. Jørgensen and O. Pfannkuche. 2003. In situ experimental evidence of the fate of a phytodetritus pulse at the abyssal sea floor. Nature 424: 763-766.

Theses

Ph.D. theses

Sandra Ehrenhauß. 2003. Impact of pore water advection on transport and remineralization of planktonic diatoms in permeable shelf sediments.

(Supervisor: Markus Hüttel)


Elimar Precht. 2003. Advective interfacial exchange in permeable sediments driven by surface gravity waves and its ecological consequences. (Supervisor: Markus Hüttel)


Hans Røy. 2003. Dynamic structure and function of the diffusive boundary layer at the seafloor. (Supervisor: Markus Hüttel)



Christian Wild. 2003. Sediment-water coupling in permeable shallow water sediments with special emphasis on carbonate sands and the cycling of coral exudates in reef environments. (Supervisor: Markus Hüttel)




Department of Microbiology



Gade, D., J. Thiermann, D. Markowsky and R. Rabus. 2003. Evaluation of two-dimensional difference gel electrophoresis for protein profiling. Journal of Molecular Microbiology and Biotechnology 5: 240-251.


Havemann, S.A., V. Brunelle, J.K. Voordouw, G. Voordouw, J.F. Heidelberg and R. Rabus. 2003. Gene expression analysis of energy metabolism mutants of Desulfovibrio vulgaris Hildenborough indicates an important role for alcohol dehydrogenase. Journal of Bacteriology. 185: 4345-4354


Herborn, C. U., N. Papanikolaou, R. Reszka, K. Grünberg, D. Schüler and J. F. Debatin. 2003. Magnetosomes as biological model for iron binding: relaxivity determination with MRI. Rofo Fortschr. Geb. Rontgenstr Neuen Bildgeb. Verfahr 175: 830-834.


Heyen, U. and D. Schüler. 2003. Growth and magnetosome formation by microaerophilic Magnetospirillum strains in an oxygen-controlled fermentor. Applied Microbiology and Biotechnology 61: 536-544.


Kniemeyer, O., T. Fischer, H. Wilkes, F.O. Glöckner and F. Widdel. 2003. Anaerobic degradation of ethylbenzene by a new type of marine sulfate-reducing bacterium. Applied and Environmental Microbiology 69: 760-768.


Könneke, M. and F. Widdel. 2003. Effect of temperature on cellular fatty acids in sulphate-reducing bacteria. Environmental Microbiology 5: 1064-1070.


Krüger, M., A. Meyerdierks, F.O. Glöckner, R. Amann, F. Widdel, M. Kube, R. Reinhardt, J. Kahnt, R. Böcher, R.K. Thauer and S. Shima. 2003. A conspicuous nickel protein in microbial mats that oxidize methane anaerobically. Nature 426: 878-881.


Probian, C., A. Wülfing and J. Harder. 2003. Anaerobic mineralization of quaternary carbon atoms: isolation of denitrifying strains on pivalic acid (2,2-dimethylpropionic acid). Applied and Environmental Microbiology 69: 1866-1870.


Schübbe, S., M. Kube, A. Scheffel, C. Wawer, U. Heyen, A. Meyerdierks, M. Madkour, F. Mayer, R. Reinhardt and D. Schüler. 2003. Characterization of a spontaneous nonmagnetic mutant of Magnetospirillum gryphiswaldense reveals a large deletion comprising a putative magnetosome island. Journal of Bacteriology 185: 5779-5790.


Schultheiss, D. and D. Schüler. 2003. Development of a genetic system for Magnetospirillum gryphiswaldense. Archives of Microbiology 179: 89-94.


Wilkes, H., S. Kühner, C. Bolm, T. Fischer, A. Classen, F. Widdel and R. Rabus. 2003. Formation of n-alkane- and cycloalkane-derived organic acids during anaerobic growth of a denitrifying bacterium with crude oil. Organic Geochemistry 34: 1313-1323.



Theses

Diploma theses

Galina Gorbik-Weiss. 2003. Molekularbiologische Untersuchungen zur Existenz von Geranioldehydrogenasen in Thauera Arten. (Supervisor: Jens Harder)


Thomas Holler. 2003. Anreicherung und Isolierung von marinen Mikroorganismen
auf Licht und organischer Substanz. (Supervisor: Jens Harder)


Birte Kallerhoff. 2003. Proteomische Untersuchungen an Desulfobacterium autotrophicum bei Änderungen des Wachstumssubstrats. (Supervisor: Ralf Rabus)


Christine Selz. 2003. Methanogene und sulfatreduzierende Mikroorganismen an einem marinen Standort mit anaerober Methanoxidation (Håkon Mosby Schlammvulkan)". (Supervisor: Friedrich Widdel)


Torben Stührmann. 2003. Enzymatische und proteomische Untersuchungen an Rhodopirellula baltica. (Supervisor: Ralf Rabus)



Lars Wöhbrandt. 2003. Transkriptionelle Regulation des anaeroben Alkylbenzol-Abbaus
im denitrifizierenden Bakterium Stamm EbN1. (Supervisor: Ralf Rabus)

Ph.D. theses

Hang T. Dinh. 2003. Microbiological study of anaerobic iron corrosion. (Supervisor: Friedrich Widdel)


Katja Nauhaus. 2003. Mikrobiologische Studien zur anaeroben Oxidation von Methan (AOM)". (Supervisor: Friedrich Widdel)



Annika Wülfing. 2003. Molekularbiologische Charakterisierung des anaeroben Monoterpenabbaus von Alcaligenes defragrans; Gene für eine Geraniol-Dehydrogenase und eine CoA Ligase. (Supervisor: Jens Harder)




Department of Molecular Ecology



Altmann, D., P. Stief, R. Amann, D. de Beer and A. Schramm. 2003. In situ distribution and activity of nitrifying bacteria in freshwater sediment. Environmental Microbiology 5: 798-803.


Beardsley, C., J. Pernthaler, W. Wosniok and R. Amann. 2003. Are readily cultured bacteria in coastal North Sea waters suppressed by selective grazing mortality? Applied and Environmental Microbiology 69: 2624-2630.


Behrens, S., B. M. Fuchs, F. Mueller and R. Amann. 2003. Is the in situ accessibility of the 16S rRNA of Escherichia coli for Cy3-labeled oligonucleotide probes predicted by a three-dimensional structure model of the 30S ribosomal subunit? Applied and Environmental Microbiology 69: 4935-4941.


Behrens, S., C. Rühland, J. Inacio, H. Huber, A. Fonseca, I. Spencer-Martins, B. M. Fuchs and R. Amann. 2003. In situ accessibility of small-subunit rRNA of members of the domains Bacteria, Archaea, and Eucarya to Cy3-labeled oligonucleotide probes. Applied and Environmental Microbiology 69: 1748-1758.


Brinkmeyer, R., K. Knittel, J. Jürgens, H. Weyland, R. Amann and E. Helmke. 2003. Diversity and structure of bacterial communities in Arctic versus Antarctic Pack Ice. Applied and Environmental Microbiology 69: 6610-6619.


Burkert, U., F. Warnecke, B. H.-D., E. Zwirnmann and J. Pernthaler. 2003. Members of a readily enriched beta-proteobacterial clade are common in the surface waters of a humic lake. Applied and Environmental Microbiology 69: 6550-6559.


Diederichs, S., C. Beardsley and E.-J. Cleven. 2003. Detection of ingested bacteria in benthic celiates using fluorescence in situ hybridization. Systematic and Applied Microbiology 26: 624-630.


Gieseke, A., L. Bjerrum, M. Wagner and R. Amann. 2003. Structure and activity of multiple nitrifying bacterial populations co-existing in a biofilm. Environmental Microbiology. 5: 355-369.


Gonzalez-Toril, E., E. Llobet-Brossa, E. O. Casamayor, R. Amann and R. Amils. 2003. Microbial ecology of an extreme acidic environment, the Tinto river. Applied and Environmental Microbiology 69: 4853-4865.


Inacio, J., S. Behrens, B. M. Fuchs, A. Fonseca, I. Spencer-Martins and R. Amann. 2003. In situ accessibility of Saccharomyces cerevisiae 26S rRNA to Cy3-labeled oligonucleotide probes comprising the D1 and D2 domains. Applied and Environmental Microbiology 69: 2899-2905.


Knittel, K., A. Boetius, A. Lemke, H. Eilers, K. Lochte, O. Pfannkuche, P. Linke and R. Amann. 2003. Activity, distribution, and diversity of sulfate reducers and other bacteria in sediments above gas hydrate (Cascadia Margin, Oregon). Geomicrobiology Journal 20: 269-294.


Mußmann, M., H. N. Schulz, B. Strotmann, T. Kjaer, L. P. Nielsen, R. A. Rossello-Mora, R. I. Amann and B. B. Jorgensen. Phylogeny and distribution of nitrate-storing Beggiatoa spp. in coastal marine sediments. Environmental Microbiology 5: 523-533.


Neretin, L. N., A. Schippers, A. Pernthaler, K. Hamann, R. Amann and B. B. Jorgensen. 2003. Quantification of dissimilatory (bi)sulphite reductase gene expression in Desulfobacterium autotrophicum using real-time RT-PCR. Environmental Microbiology 5: 660-671.


Pernthaler, J., A. Pernthaler and R. Amann. 2003. Automated enumeration of groups of marine picoplankton after fluorescence in situ hybridization. Applied and Environmental Microbiology 69: 2631-2637.


Schramm, A., S. K. Davidson, J. A. Dodsworth, H. L. Drake, D. A. Stahl and N. Dubilier. 2003. Acidovorax-like endosymbionts in the nephridia of earthworms. Environmental Microbiology 5: 804-809.


Sekar, R., A. Pernthaler, J. Pernthaler, F. Warnecke, T. Posch and R. Amann. 2003. An improved protocol for the quantification of freshwater actinobacteria by fluorescence in situ hybridization. Applied and Environmental Microbiology 69: 2928-2935.



Zubkov, M. V., B. M. Fuchs, G. A. Tarran, P. H. Burkill and R. Amann. 2003. High rate of uptake of organic nitrogen compounds by Prochlorococcus cyanobacteria as a key to their dominance in oligotrophic oceanic waters. Applied and Environmental Microbiology 69: 1299-1304.

Theses

Diploma theses (7)

Elke Allers. 2003. Molekularbiologische Charakterisierung der mikrobiellen Gemeinschaft in Korallenexudaten. (Supervisor: Jakob Pernthaler)


Adrian Baier. 2003. Ist Differential Display eine geeignete Methode zur Analyse differentieller Genexpression von umweltrelevanten Mikroorganismen? Untersuchungen am psychrophilen, sulfatreduzierenden Bakterium Desulfotalea psychrophila. Fachbereich Biologie/Chemie der Universität Bremen. (Supervisor: Rudolf Amann)


Linda Keller. 2003. Herbstsukzession und Aktivität der pelagischen Bakteriengemeinschaft in der Deutschen Bucht. (Supervisor: Jakob Pernthaler)


Miriam Perner. 2003. Biogeochemische und mikrobiologische Charakterisierung mariner Sedimente vor Elba - ein Beitrag zur ökosystemaren Analyse bakteriensymbiontischer Oligochaeten. Universität Hamburg. (Supervisor: Nicole Dubilier)



Dagmar Wöbken. 2003. Vergleichende molekularbiologische Analyse von Bakterioplankton des oxischen und suboxischen marinen Pelagials. Fachbereich Biologie der Universität Hannover. (Supervisor: Bernhard Fuchs)

Ph.D. theses (7)

Christine Beardsley. 2003. In situ dynamics and predator-prey interactions in the microbial plankton of the North Sea. (Supervisor: Jakob Pernthaler)


Sebastian Behrens. 2003. Methodological aspects of fluorescence in situ hybridization for the identification of microorganisms. (Supervisor: Rudolf Amann)


Robin Brinkmeyer (Alfred Wegener Institute, Bremerhaven). 2003. Molecular characterization of bacterial communities in Arctic sea ice. (Supervisor: Rudolf Amann)


Michael Kube (MPI for Molecular Genetics, Berlin). 2003. Sequenzierung und Strukturen von Pirellula sp. Stamm 1. (Supervisor: Rudolf Amann)



Department of Molecular Ecology: Microbial Genomics Group



Gade, D., H. Schlesner, F. O. Glöckner, R. Amann, S. Pfeiffer and M. Thomm. 2003. Identification of planctomycetes with order-, genus- and strain-specific 16S rRNA-targeted probes. FEMS Microbiology Ecology, in press.


Peplies, J., S. C. K. Lau, A. Pernthaler, R. Amann and F. O. Glöckner. 2003. Application and validation of DNA microarrays for the 16S rRNA-based analysis of marine bacterioplankton. Environmental Microbiology, in press.


Theses

Ph.D. theses

Jörg Peplies. 2003. DNA-Microarrays für die hochparallele Analyse natürlicher mikrobieller Lebensgemeinschaften. (Supervisor: Frank Oliver Glöckner)

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© 2004, Max Planck Institute for Marine Microbiology