Publications 2003
Department of
Biogeochemistry
Direktor:
Prof. Dr. Bo Barker Jørgensen
Department
of Biogeochemistry: Biogeochemistry group
Arnosti,
C. and B. B. Jørgensen. 2003. High activity and low
temperature optima of extracellular enzymes in Arctic sediments:
implications for carbon cycling by heterotrophic microbial
communities. Marine Ecology Progress Series 249: 15-24.
Boetius,
A., B. B. Jørgensen, R. Amann, J. P. Henriet, K. U.
Hinrichs, K. Lochte, B. J. MacGregor and G. Voordouw. 2003.
Microbial systems in sedimentary environments of continental margins,
p. 479-495. In G. Wefer, D. Billet, D. Hebbeln, B. B.
Jørgensen, M. Schlüter and T. v. Weering (ed.), Ocean
Margin Systems. Springer Verlag, Berlin.
Brüchert,
V. and C. Arnosti. 2003. Anaerobic Carbon
Transformation:Experimental Studies With Flow-Through Cells. Marine
Chemisty 80: 171-183.
Brüchert,
V., B. B. Jørgensen, K. Neumann, D. Riechmann, M. Schlösser
and H. Schulz. 2003. Regulation of bacterial sulfate reduction
and hydrogen sulfide fluxes in the central Namibian coastal upwelling
zone. Geochimica et Cosmochimica Acta 67: 4505-4518.
D´Hondt,
S., B. B. Jørgensen, J. Miller and the Leg 201 Scientific
party. 2003. Controls on Microbial Communities in Deeply Buried
Sediments, Eastern Equatorial Pacific and Peru Margin Sites
1225-1231, 27 January – 29 March 2002. Proceedings of the Ocean
Drilling Program, Initial Reports Vol. 201, National Science
Foundation and Joint Oceanographic Instituteions, Inc. (eds.).
D´Hondt,
S., B. B. Jørgensen, J. Miller and the Leg 201 Scientific
party. 2003. ODP Leg 201 explores microbial life in deeply buried
marine sediments of Peru, JOIDES Journal, Vol. 29, No. 1,
11-15.
Elvert,
M., A. Boetius, K. Knittel and B. B. Jørgensen. 2003.
Characterization of specific membrane fatty acids as chemotaxonomic
markers for sulfate-reducing bacteria involved in anaerobic oxidation
of methane. Geomicrobiology Journal, 20: 403-419.
Jetten,
M. S. M., O. Sliekers, M. M. M. Kuypers, T. Dalsgaard, L. van
Niftrik, I. Cirpus, K. van de Pas-Schoonen, G. Lavik, B. Thamdrup, D.
Les Paslier, H. Op den Camp, S. Hulth, L. P. Nielsen, W. Abma, K.
Third, P. Engström, J. G. Kuenen, B. Barker Jørgensen, D.
Canfield, J. S. Sinninghe Damsté, N. P. Revsbech, J. Fuerst,
J. Weissenbach, M. Wagner, I. Schmidt, M. Schmid and M.
Strous. 2003. Anaerobic ammonium oxidation by marine and
freshwater planctomycete-like bacteria. Applied Microbiology
Biotechnology 63: 107-114.
Jørgensen,
B. B. 2003. Life in the deep sub-seafloor biosphere. Energy,
Exploration & Exploitation 21: 319-322.
Kallmeyer,
J., T. G. Ferdelman, K.-H. Jansen and B. B. Jørgensen.
2003. A high-pressure thermal gradient block for investigating
microbial activity in multiple deep-sea samples. Journal of
Microbiological Methods 55: 165-172.
Klages,
M., A. Boetius, J. P. Christensen, H. Deubel, D. Piepenburg, I.
Schewe and T. Soltwedel. 2003. The benthos of Arctic Seas and its
role for the carbon cycle at the seafloor, p. 139-167 In R.
Stein, R. W. Macdonald (eds.) The Arctic Organic Carbon Cycle,
Springer Verlag, Heidelberg.
Kuypers,
M. M. M., A. O. Sliekers, G. Lavik, M. Schmid, B. B. Jørgensen,
J. G. Kuenen, J. S. Sinninghe Damsté, M. Strous and M. S. M.
Jetten. 2003. Anaerobic ammonium oxidation by anammox bacteria in
the Black Sea. Nature 422: 608-611.
Neretin,
L. N., M. E. Böttcher and V. A. Grinenko. 2003. Sulfur
isotope geochemistry of the Black Sea water column. Chemical Geology
200: 59-69.
Neretin,
L. N., C. Pohl, G. Jost, T. Leipe and F. Pollehne. 2003.
Manganese cycling in the Gotland Deep, Baltic Sea. Marine Chemistry
82: 125-143.
Neretin,
L., A. Schippers, A. Pernthaler, K. Hamann, R. Amann and B. B.
Jørgensen. 2003. Quanitification of dissimilatory
(bi)sulphite reductase gene expression in Desulfobacterium
autotrophicum using real-time RT-PCR. Environmental Microbiology 5:
660-671.
Revsbech,
N. P. and B. B. Jørgensen. 2003. The role of
microorganisms in aquatic environments (in Danish), p. 365-387. In
A. W. Hansen et. al. (eds.), Top research at the University of
Aarhus. Acta Jutlandica 78, Aarhus Universitetsforlag.
Sinninghe
Damsté, J. S., M. M. M. Kuypers, S. Schouten, S. Schulte and
J. Rullkötter. 2003. The lycopane/C31 n-alkane ratio
as a proxy to assess palaeoxicity during sediment deposition. Earth
and Planetary Science Letters 209: 215-226.
Treude,
T., A. Boetius, K. Knittel, K. Wallmann and B. B. Joergensen. 2003.
Anaerobic oxidation of methane above gas hydrates at Hydrate Ridge,
NE Pacific. Marine Ecology Progress Series 264: 1-14.
Wefer,
G., D. Billet, D. Hebbeln, B. B. Jørgensen, M. Schlüter,
T. van Weering (eds.). 2003. Ocean Margin Systems, 495 pp.
Springer Verlag, Berlin.
Theses
Diploma theses
Stephanie
Batel. 2003. Biogeochemische Umsatzprozesse in einem tidalen
Oberflächensediment der südlichen Nordsee. Universität
Oldenburg.
(Supervisor:
Michael E. Böttcher)
Heiko
Löbner. 2003. Der regulatorische Einfluß der
Sulfat-und Methankonzentration auf die anaerobe Methanoxidation in
marinen Sedimenten. (Supervisor: Antje Boetius)
Kyriakos
Vamvakoupolos. 2003. Entwicklung einer Einbettungsmethode für
die Untersuchung intakter Sedimentstrukturen mit Fokus auf die dort
lebenden Mikroorganismen (Supervisor: Ole Larsen)
Ph. D. theses
Niko
Finke. 2003. The role of volatile fatty acids and hydrogen in the
degradation of organic matter in marine sediments. (Supervisor: Bo
Barker Jørgensen)
Jens
Kallmeyer. 2003. Sulfate reduction in the deep biosphere.
(Supervisor: Tim Ferdelman)
Habilitation
theses
Michael
Böttcher. 2003. Contributions to the biogeochemistry of
early diagenetic processes in continental margin sediments with
special regard to manganese and stable isotopes (S, O).
Department
of Biogeochemistry: Microsensor Group
Altmann,
D., P. Stief, R. Amann, D. de Beer and A. Schramm. 2003. In situ
distribution and activity of nitrifying bacteria in freshwater
sediment. Environmental Microbiology 5: 798-803.
Gieseke,
A., L. Bjerrum, M. Wagner and R. Amann. 2003. Structure and
activity of multiple nitrifying bacterial populations co-existing in
a biofilm. Environmental Microbiology 5: 355-369.
Grossart,
H.-P., T. Kiørboe, K. Tang and H. Ploug. 2003. Bacterial
Colonization of Marine Snow Particles: Growth and Inter-Specific
Interactions. Applied and Environmental Microbiology 69:
3500-3509.
Jonkers,
H. M. and R. M. M. Abed. 2003. Identification of aerobic
heterotrophic bacteria from the photic zone of a hypersaline
microbial mat. Aquatic Microbial Ecoloby 30: 127-133.
Jonkers,
H. M., R. Ludwig, R. de Wit, O. Pringault, G. Muyzer, H. Niemann, N.
Finke and D. de Beer. 2003. Structural and functional analysis of
a microbial mat ecosystem from a unique permanent hypersaline inland
lake: 'La Salada de Chiprana' (NE Spain). FEMS Microbiology Ecology
44: 175-189.
Passow,
U., A. Engel and H. Ploug. 2003. The role of aggregation for the
dissolution of diatom frustules. FEMS Microbiology Ecology 46:
247-255.
Stief,
P., A. Schramm, D. Altmann and D. de Beer. 2003. Temporal
variation of nitrification rates in experimental freshwater sediments
enriched with ammonia or nitrite. FEMS Microbiology Ecology 46:
63-71.
van
Keulen, G., H. M. Jonkers, D. Claessen, L. Dijkhuizen and H. A. B.
Wösten. 2003. Differentiation and Anaerobiosis in Standing
Liquid Cultures of Streptomyces coelicolor. Journal of
Bacteriology 185: 1455-1458.
Theses
Ph. D. theses
Dörte
Altmann. 2003. Nitrification in freshwater sediments as studied
with microsensors and fluorescence in situ hybridization.
(Supervisor: Peter Stief)
Björn
Grunwald. 2003. Optoelektronische Meßsysteme hoher
örtlicher Auflösung für phototrophe Organismen.
(Supervisor: Gerhard Holst)
Department
of Biogeochemistry: Flux Group
Aberle,
N. and U. Witte. 2003. Deep-sea macrofauna exposed to a simulated
sedimentation event in the abyssal NE Atlantic: in situ pulse chase
experiments using 13C labeled phytodetritus. Marine Ecology Progress
Series 251: 37-47.
Aspetsberger,
F., F. Huber, S. Kargl, B. Scharinger, P. Peduzzi and T. Hein.
2003. Particulate organic matter dynamics in a river floodplain
system: impact of hydrological connectivity. Archives of Hydrobiology
156: 23-42.
Berg,
P., H. Røy, F. Janssen, V. Meyer, B. B. Jørgensen, M.
Huettel and D. de Beer. 2003. Oxygen uptake by aquatic sediments
measured with a novel non-invasive eddy-correlation technique. Marine
Ecology Progress Series 261: 75-83.
Burnett,
W., H. Bokuniewicz, M. Huettel, W. S. Moore and M. Taniguchi.
2003. Groundwater and pore water inputs to the coastal zone.
Biogeochemistry 66: 3-33.
Fabricius,
K., C. Wild, E. Wolanski and D. Abele. 2003. Effect of
transparent exopolymer particles and muddy terrigenous sediments on
the survival of hard coral recruits. Estuarine Coastal Shelf Science
57: 613-621.
Forster,
S., A. Khalili and J. Kitlara. 2003. Variation of non-local
irrigation in a subtidal benthic community. Journal of Marine
Research 61: 335-357.
Glud,
R. N., J. K. Gundersen, H. Røy and B. B. Jørgensen.
2003. Seasonal dynamics of benthic O2 uptake in a semi enclosed bay:
Importance of diffusion and fauna activity. Limnology and
Oceanography 48: 1265-1276.
Huettel,
M., H. Røy, E. Precht and S. Ehrenhauss. 2003.
Hydrodynamical impact on biogeochemical processes in aquatic
sediments. Hydrobiologia 494: 231-236.
Khalili,
A. and I. S. Shivakumara.
2003. Non-Darcian effects on the onset of convection in a porous
layer with throughflow. Transport in Porous Media 53:
245-263.
Precht,
E. and M. Huettel. 2003.
Advective pore water exchange driven by surface gravity waves and its
ecological implications. Limnology and Oceanography 48:
1674-1684.
Rasheed,
M., M. Badran and M. Huettel.
2003. Influence of sediment permeability and mineral composition on
organic matter decomposition in three sediments from the Gulf of
Aqaba, Red Sea. Estuarine Coastal Shelf Science 57:
369-384.
Rasheed,
M., M. Badran and M. Huettel.
2003. Particulate matter filtration and seasonal nutrient dynamics in
permeable carbonate and silicate sands of the Gulf of Aqaba, Red Sea.
Coral Reefs 22:
167-177.
Reimers,
C. E., H. A. Stecher, G. L. Taghon, C. M. Fuller, M. Huettel, A.
Rusch, N. Ryckelynck and C. Wild.
2003. In-situ measurements of advective solute transport in permeable
shelf sands. Continental Shelf Research, in press.
Rusch,
A., M. Huettel, C. E. Reimers, G. L. Taghon and C. M. Fuller. 2003.
Activity and distribution of bacterial populations in Middle Atlantic
Bight shelf sands. FEMS Microbiology Ecology 44:
89-100.
Viollier,
E., C. Rabouille, S. E. Apitz, E. Breuer, G. Chaillou, K. Dedieu, Y.
Furakawa, C. Grenz, P. Hall, F. Janssen, J. L. Morford, J.-C.
Poggiale, S. Roberts, T. Shimmield, M. Taillefert, A. Tengberg, F.
Wenzhöfer and U. Witte. 2003.
Benthic biogeochemistry: state of the art technologies and guidelines
for the future of in situ survey. Journal of Experimental
Marine Biology and Ecology 285-286:
5-31.
Witte,
U., N. Aberle, M. Sand and F. Wenzhöfer.
2003. Rapid response of a deep-sea benthic community to POM
enrichment: an in situ experimental study. Marine Ecology
Progress Series 251:
27-36.
Witte,
U., F. Wenzhöfer, S. Sommer, A. Boetius, P. Heinz, N. Aberle, M.
Sand, A. Cremer, W.-R. Abraham, B. B. Jørgensen and O.
Pfannkuche. 2003.
In situ experimental evidence of the fate of a phytodetritus pulse at
the abyssal sea floor. Nature 424:
763-766.
Theses
Ph.D. theses
Sandra
Ehrenhauß. 2003. Impact of pore water advection on
transport and remineralization of planktonic diatoms in permeable
shelf sediments.
(Supervisor:
Markus Hüttel)
Elimar
Precht. 2003. Advective interfacial exchange in permeable
sediments driven by surface gravity waves and its ecological
consequences. (Supervisor: Markus Hüttel)
Hans
Røy. 2003. Dynamic structure and function of the diffusive
boundary layer at the seafloor. (Supervisor: Markus Hüttel)
Christian
Wild. 2003. Sediment-water coupling in permeable shallow water
sediments with special emphasis on carbonate sands and the cycling of
coral exudates in reef environments. (Supervisor: Markus Hüttel)
Department
of Microbiology
Gade,
D., J. Thiermann, D. Markowsky and R. Rabus. 2003. Evaluation of
two-dimensional difference gel electrophoresis for protein profiling.
Journal of Molecular Microbiology and Biotechnology 5: 240-251.
Havemann,
S.A., V. Brunelle, J.K. Voordouw, G. Voordouw, J.F. Heidelberg and R.
Rabus. 2003. Gene expression analysis of energy metabolism
mutants of Desulfovibrio vulgaris Hildenborough indicates an
important role for alcohol dehydrogenase. Journal of Bacteriology.
185: 4345-4354
Herborn,
C. U., N. Papanikolaou, R. Reszka, K. Grünberg, D. Schüler
and J. F. Debatin. 2003. Magnetosomes as biological model for
iron binding: relaxivity determination with MRI. Rofo
Fortschr. Geb. Rontgenstr Neuen Bildgeb. Verfahr 175: 830-834.
Heyen,
U. and D. Schüler. 2003. Growth and
magnetosome formation by microaerophilic Magnetospirillum
strains in an oxygen-controlled fermentor. Applied Microbiology and
Biotechnology 61: 536-544.
Kniemeyer,
O., T. Fischer, H. Wilkes, F.O. Glöckner and F. Widdel.
2003. Anaerobic degradation of ethylbenzene by a new type of marine
sulfate-reducing bacterium. Applied and Environmental Microbiology
69: 760-768.
Könneke,
M. and F. Widdel. 2003. Effect of temperature on cellular fatty
acids in sulphate-reducing bacteria. Environmental Microbiology 5:
1064-1070.
Krüger,
M., A. Meyerdierks, F.O. Glöckner, R. Amann, F. Widdel, M. Kube,
R. Reinhardt, J. Kahnt, R. Böcher, R.K. Thauer and S. Shima.
2003. A conspicuous nickel protein in microbial mats that oxidize
methane anaerobically. Nature 426: 878-881.
Probian,
C., A. Wülfing and J. Harder. 2003. Anaerobic mineralization
of quaternary carbon atoms: isolation of denitrifying strains on
pivalic acid (2,2-dimethylpropionic acid). Applied and Environmental
Microbiology 69: 1866-1870.
Schübbe,
S., M. Kube, A. Scheffel, C. Wawer, U. Heyen, A. Meyerdierks, M.
Madkour, F. Mayer, R. Reinhardt and D. Schüler. 2003.
Characterization of a spontaneous nonmagnetic mutant of
Magnetospirillum gryphiswaldense reveals a large deletion
comprising a putative magnetosome island. Journal of Bacteriology
185: 5779-5790.
Schultheiss,
D. and D. Schüler. 2003. Development of a genetic system for
Magnetospirillum gryphiswaldense. Archives of Microbiology
179: 89-94.
Wilkes,
H., S. Kühner, C. Bolm, T. Fischer, A. Classen, F. Widdel and R.
Rabus. 2003. Formation of n-alkane- and
cycloalkane-derived organic acids during anaerobic growth of a
denitrifying bacterium with crude oil. Organic Geochemistry
34: 1313-1323.
Theses
Diploma theses
Galina
Gorbik-Weiss. 2003. Molekularbiologische Untersuchungen zur
Existenz von Geranioldehydrogenasen in Thauera Arten.
(Supervisor: Jens Harder)
Thomas
Holler. 2003. Anreicherung und Isolierung von marinen
Mikroorganismen auf Licht und organischer Substanz. (Supervisor:
Jens Harder)
Birte
Kallerhoff. 2003. Proteomische Untersuchungen an Desulfobacterium
autotrophicum bei Änderungen des Wachstumssubstrats.
(Supervisor: Ralf Rabus)
Christine
Selz. 2003. Methanogene und sulfatreduzierende Mikroorganismen an
einem marinen Standort mit anaerober Methanoxidation (Håkon
Mosby Schlammvulkan)". (Supervisor: Friedrich Widdel)
Torben
Stührmann. 2003. Enzymatische und proteomische
Untersuchungen an Rhodopirellula baltica. (Supervisor: Ralf Rabus)
Lars
Wöhbrandt. 2003. Transkriptionelle Regulation des anaeroben
Alkylbenzol-Abbaus im denitrifizierenden Bakterium Stamm EbN1.
(Supervisor: Ralf Rabus)
Ph.D.
theses
Hang
T. Dinh. 2003.
Microbiological study of anaerobic iron corrosion. (Supervisor:
Friedrich Widdel)
Katja
Nauhaus. 2003.
Mikrobiologische Studien zur anaeroben Oxidation von Methan (AOM)".
(Supervisor: Friedrich Widdel)
Annika
Wülfing. 2003.
Molekularbiologische Charakterisierung des anaeroben Monoterpenabbaus
von Alcaligenes defragrans; Gene für eine
Geraniol-Dehydrogenase und eine CoA Ligase. (Supervisor:
Jens Harder)
Department
of Molecular Ecology
Altmann,
D., P. Stief, R. Amann, D. de Beer and A. Schramm.
2003. In situ distribution and activity of nitrifying bacteria in
freshwater sediment. Environmental Microbiology 5: 798-803.
Beardsley,
C., J. Pernthaler, W. Wosniok and R. Amann. 2003. Are readily
cultured bacteria in coastal North Sea waters suppressed by selective
grazing mortality? Applied and
Environmental Microbiology 69:
2624-2630.
Behrens,
S., B. M. Fuchs, F. Mueller and R. Amann. 2003. Is the in situ
accessibility of the 16S rRNA of Escherichia coli for Cy3-labeled
oligonucleotide probes predicted by a three-dimensional structure
model of the 30S ribosomal subunit? Applied
and Environmental Microbiology 69:
4935-4941.
Behrens,
S., C. Rühland, J. Inacio, H. Huber, A. Fonseca, I.
Spencer-Martins, B. M. Fuchs and R. Amann. 2003. In situ
accessibility of small-subunit rRNA of members of the domains
Bacteria, Archaea, and Eucarya to Cy3-labeled oligonucleotide probes.
Applied and Environmental Microbiology 69:
1748-1758.
Brinkmeyer,
R., K. Knittel, J. Jürgens, H. Weyland, R. Amann and E. Helmke.
2003. Diversity and structure of bacterial communities in Arctic
versus Antarctic Pack Ice. Applied and
Environmental Microbiology 69:
6610-6619.
Burkert,
U., F. Warnecke, B. H.-D., E. Zwirnmann and J. Pernthaler. 2003.
Members of a readily enriched beta-proteobacterial clade are common
in the surface waters of a humic lake. Applied
and Environmental Microbiology 69:
6550-6559.
Diederichs,
S., C. Beardsley and E.-J. Cleven. 2003. Detection of ingested
bacteria in benthic celiates using fluorescence in situ
hybridization. Systematic and Applied Microbiology 26: 624-630.
Gieseke,
A., L. Bjerrum, M. Wagner and R. Amann. 2003. Structure and
activity of multiple nitrifying bacterial populations co-existing in
a biofilm. Environmental Microbiology. 5: 355-369.
Gonzalez-Toril,
E., E. Llobet-Brossa, E. O. Casamayor, R. Amann and R. Amils. 2003.
Microbial ecology of an extreme acidic environment, the Tinto river.
Applied and Environmental Microbiology 69:
4853-4865.
Inacio,
J., S. Behrens, B. M. Fuchs, A. Fonseca, I. Spencer-Martins and R.
Amann. 2003. In situ accessibility of Saccharomyces cerevisiae
26S rRNA to Cy3-labeled oligonucleotide probes comprising the D1 and
D2 domains. Applied and Environmental
Microbiology 69: 2899-2905.
Knittel,
K., A. Boetius, A. Lemke, H. Eilers, K. Lochte, O. Pfannkuche, P.
Linke and R. Amann. 2003. Activity, distribution, and diversity
of sulfate reducers and other bacteria in sediments above gas hydrate
(Cascadia Margin, Oregon). Geomicrobiology Journal 20:
269-294.
Mußmann,
M., H. N. Schulz, B. Strotmann, T. Kjaer, L. P. Nielsen, R. A.
Rossello-Mora, R. I. Amann and B. B. Jorgensen. Phylogeny
and distribution of nitrate-storing Beggiatoa spp. in coastal
marine sediments. Environmental Microbiology 5: 523-533.
Neretin,
L. N., A. Schippers, A. Pernthaler, K. Hamann, R.
Amann and B. B. Jorgensen. 2003. Quantification of
dissimilatory (bi)sulphite reductase gene expression in
Desulfobacterium autotrophicum using real-time RT-PCR.
Environmental Microbiology 5: 660-671.
Pernthaler,
J., A. Pernthaler and R. Amann. 2003. Automated enumeration of
groups of marine picoplankton after fluorescence in situ
hybridization. Applied and Environmental
Microbiology 69: 2631-2637.
Schramm,
A., S. K. Davidson, J. A. Dodsworth, H. L. Drake, D. A. Stahl and N.
Dubilier. 2003. Acidovorax-like endosymbionts in the
nephridia of earthworms. Environmental Microbiology 5: 804-809.
Sekar,
R., A. Pernthaler, J. Pernthaler, F. Warnecke, T. Posch and R. Amann.
2003. An improved protocol for the quantification
of freshwater actinobacteria by fluorescence in situ hybridization.
Applied and Environmental Microbiology 69:
2928-2935.
Zubkov,
M. V., B. M. Fuchs, G. A. Tarran, P. H. Burkill and R. Amann.
2003. High rate of uptake of organic nitrogen compounds by
Prochlorococcus cyanobacteria as a key to their dominance in
oligotrophic oceanic waters. Applied and
Environmental Microbiology 69: 1299-1304.
Theses
Diploma theses (7)
Elke
Allers. 2003. Molekularbiologische Charakterisierung der
mikrobiellen Gemeinschaft in Korallenexudaten. (Supervisor: Jakob
Pernthaler)
Adrian
Baier. 2003. Ist Differential Display eine geeignete Methode zur
Analyse differentieller Genexpression von umweltrelevanten
Mikroorganismen? Untersuchungen am psychrophilen, sulfatreduzierenden
Bakterium Desulfotalea psychrophila. Fachbereich
Biologie/Chemie der Universität Bremen. (Supervisor: Rudolf
Amann)
Linda
Keller. 2003. Herbstsukzession und Aktivität der pelagischen
Bakteriengemeinschaft in der Deutschen Bucht. (Supervisor: Jakob
Pernthaler)
Miriam
Perner. 2003. Biogeochemische und mikrobiologische
Charakterisierung mariner Sedimente vor Elba - ein Beitrag zur
ökosystemaren Analyse bakteriensymbiontischer Oligochaeten.
Universität Hamburg. (Supervisor: Nicole Dubilier)
Dagmar
Wöbken. 2003. Vergleichende molekularbiologische Analyse von
Bakterioplankton des oxischen und suboxischen marinen Pelagials.
Fachbereich Biologie der Universität Hannover. (Supervisor:
Bernhard Fuchs)
Ph.D. theses (7)
Christine
Beardsley. 2003. In situ dynamics and predator-prey interactions
in the microbial plankton of the North Sea. (Supervisor: Jakob
Pernthaler)
Sebastian
Behrens. 2003. Methodological aspects of fluorescence in situ
hybridization for the identification of microorganisms. (Supervisor:
Rudolf Amann)
Robin
Brinkmeyer (Alfred Wegener Institute, Bremerhaven). 2003.
Molecular characterization of bacterial communities in Arctic sea
ice. (Supervisor: Rudolf Amann)
Michael
Kube (MPI for Molecular Genetics, Berlin). 2003.
Sequenzierung und Strukturen von Pirellula sp. Stamm
1. (Supervisor: Rudolf Amann)
Department
of Molecular Ecology: Microbial Genomics Group
Gade,
D., H. Schlesner, F. O. Glöckner, R. Amann, S. Pfeiffer and M.
Thomm. 2003. Identification of planctomycetes
with order-, genus- and strain-specific 16S rRNA-targeted probes.
FEMS Microbiology Ecology,
in press.
Peplies,
J., S. C. K. Lau, A. Pernthaler, R. Amann and F. O. Glöckner.
2003. Application and validation of DNA microarrays for the 16S
rRNA-based analysis of marine bacterioplankton. Environmental
Microbiology, in press.
Theses
Ph.D.
theses
Jörg
Peplies. 2003. DNA-Microarrays für die
hochparallele Analyse natürlicher mikrobieller
Lebensgemeinschaften. (Supervisor: Frank Oliver Glöckner)
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